Summary
Overview
Work History
Education
Skills
Certification
Affiliations
Orcid
Fellowships and awards
Contribution as resource person
Contribution as reviewer
National exams qualified
Teaching mentoring experience
Publications
Best paper awards
Select presentation of papers in conference
Other notable credits
Projects
Disclaimer
Timeline
Generic
MADHUMATHI IRULAPPAN

MADHUMATHI IRULAPPAN

Post-Doctoral Fellow
Vellore

Summary

I work on the Molecular Genetics of Antimicrobial Resistance (AMR) of clinical pathogens.

Overview

2
2
Certifications

Work History

Post-Doctoral Researcher

Department of Clinical Microbiology, Christian Medical College & Hospital
8 2022 - Current

Education

Ph.D - Molecular Biology

School of Biological Sciences
Madurai, Tamil Nadu
07.2022 -

M.Sc. - Genomics

Madurai Kamaraj University
Madurai, Tamil Nadu
01.2011 - undefined

B.Sc. - Biotechnology

Sri Kaliswari College (Madurai Kamaraj University)
Madurai, Tamil Nadu
01.2009 - undefined

Skills

Bioinformatics: NGS - Microbial Genomics - WGS data analysis using various tools and pipeline - Prokka, Roary, Abriba (Linux based using QC, assembly, annotation, snippy, pangenome-phylogenetic tree, SNP-Phylogenetic tree) In-silico Primer Designing, Sequence Analysis, alignment, BLAST Analysis, Protein Structural Analysis, Genomic analysis of AMR genes & plasmids

Certification

Training workshop for Microbial Genomics & Next Generation Sequencing Informatics, 11/16/22, 11/18/22, Department of Clinical Microbiology, Christian Medical College Vellore, Vellore, Sanger Institute, University of Cambridge

Affiliations

  • Microbiology Society, C045865, United Kingdom
  • American Society for Microbiology

Orcid

https://orcid.org/0000-0002-9856-604X

Fellowships and awards

  • SRF - Basic Scientific Research Fellowship, 06/01/17, 06/01/20, University Grants Commission, India, Molecular Genetic Analysis of the regulation of macromolecular processes in Bacteria.
  • JRF - Basic Scientific Research Fellowship, 06/01/15, 06/01/17, University Grants Commission, India, Molecular Genetic Analysis of the regulation of macromolecular processes in Escherichia coli.
  • SRF -IPLS, 09/01/14, 03/01/15, University Grants Commission (Centre for Excellence in Genomic Sciences), India, Molecular Genetic Analysis of the regulation of macromolecular processes Escherichia coli
  • JRF -IPLS, 09/01/12, 08/01/14, University Grants Commission (Centre for Excellence in Genomic Sciences), India, Studies on Genetic Regulation in Escherichia coli

Contribution as resource person

  • Differential Gene Expression in Plants and Bacteria, UGC - NRCBS, Madurai, Tamil Nadu, 02/01/17, 02/14/17
  • Bacterial Whole Genome Sequencing and Genome Data Mining, Christian Medical College and ICMR, Delhi, 10/03/22, 10/09/22
  • Hands-on-training on Diphtheria and Pertussis Laboratory Techniques, WHO and CMC, Vellore, Vellore, 04/24/23, 04/29/23

Contribution as reviewer

  • The Lancet Infectious Diseases
  • Nature Communications
  • International Journal of Biological Macromolecules

National exams qualified

GATE

Teaching mentoring experience

  • M.Sc., Biochemistry, M.Sc. dissertating Co-Guide, 2014, 2020
  • M.Sc., Genomics, Laboratory in Bacterial Genetics and Molecular Biology, 2020, 2021

Publications

  • Arijit Pal, Dipannita Ghosh, Pratyusha Thakur, Priya Nagpal, Madhumathi Irulappan, Karthik Maruthan, Sanket Mukherjee, Nikita G Patil, Tanmay Dutta, Balaji Veeraraghavan, Perumal Vivekanandan, Clinically relevant mutations in regulatory regions of metabolic genes facilitate early adaptation to ciprofloxacin in Escherichia coli, Nucleic Acids Research, 2024, 16.6
  • Sethuvel DP, Bakthavatchalam YD, Karthik M, Irulappan M, Shrivastava R, Periasamy H, Veeraraghavan B, β-Lactam Resistance in ESKAPE Pathogens Mediated Through Modifications in Penicillin-Binding Proteins: An Overview, Infectious Diseases and Therapy, 2023 Mar, 12, 3, 829-41, 6.1
  • Irulappan M, Mutreja A, Veeraraghavan B, Genomic surveillance for comprehensive Shigella management, The Lancet Infectious Diseases, 2023 Jun 1, 23, 6, 645-7, 71.4
  • Ashwin Sri Bala S, Madhumathi I Vinodha S, Munavar MH, Glu571 of PheT plays a pivotal role in the thermal stability of Escherichia coli PheRS enzyme, Journal of basic microbiology, 2018 Jun, 58, 6, 475-91, 3.97

Best paper awards

  • Genetic evidence for the possible functional similarity between antibiotic Hygromycin and the Biological Toxin Doc in Escherichia coli and its Implications, International Conference on Bacterial Expressions, 12/01/15, Bangalore, Selected for special Oral Presentation
  • Molecular Genetic Analysis of HygR Mutants of Escherichia coli Reveal a Possible Interlink Between Hygromycin Resistance and Programmed Cell Death in Bacteria, International Conference on Recent Trends in Biosciences, 04/07/16, Karaikudi, Best Oral Presentation Award
  • Fosfomycin and aminoglycoside resistance co-carriage in carbapenem resistant E. coli and associated treatment complications, 12th Annual Research Day, 10/06/22, Vellore, First Prize in the poster presentation
  • Molecular Genetic characterization of fosfomycin resistance mechanism and antibiotics combinations to combat, MICROCON-2022, Bhubaneswar, Selected for Bacteriology Oral award
  • The Pertussis Puzzle: Unraveling Resurgence and Vaccine Evolution for a Safer Future, MICROCON-2023, Lucknow, First Prize in Oral Presentation
  • Decoding Fosfomycin Resistance in E. coli and K. pneumoniae: Insights into Heterogeneous Mechanisms, Winter Symposium & South Zone MicroCon 2024, Vellore, Third Prize in Oral Presentation

Select presentation of papers in conference

  • Genetic evidence for a possible interlink between hygromycin resistance and bacterial apoptosis, National Conference on Recent Trends in Modern Biology & 46th Aqua-Terr Annual Conference on Biological Sciences, 02/27/15
  • Genetic evidence for interaction between β-subunit of RNA polymerase and pheT product and its implications in transcription control by Fit factor in Escherichia coli, National Conference on Recent Trends in Modern Biology & 46th Aqua-Terr Annual Conference on Biological Sciences, 02/27/15
  • Isolation and characterization of Amikacin resistant mutants in Escherichia coli and their implications in multi drug resistance, National Conference on Recent Trends in Modern Biology & 46th Aqua-Terr Annual Conference on Biological Sciences, 02/27/15
  • The Base-Pair Co-ordinate G293 of pheS Gene of Escherichia coli Defines a 'Hot Spot' for occurrence of Temperature Sensitive Mutants: Implications and its impact, International Conference on Recent Trends in Biological Research, 12/22/15, Sivakasi
  • Isolation and Genetic Characterization of Chromosomal Mutations Leading to Hygromycin Resistance in Escherichia coli: Impact of Glucose and Extracellular Death factor During Selection, National Conference on Recent Trends in Modern Biology & 47th Aqua-terr Annual Conference on Biological Sciences, 02/27/16
  • Ascertaining the role of acrE in Amninoglycosidic Antibiotic Specific Multidrug Resistance in Escherichia coli, National Conference on Recent Trends in Modern Biology & 47th Aqua-Terr Annual Conference on Biological Sciences, 02/27/16
  • Suppression of Hypersensitivity to Antibiotics in Escherichia coli lexA3 Strain by mutant forms of RNA polymerase, Aqua-Terr Golden Jubilee International Conference on Genome Biology and Host Defence: Bacteria to Mammals, 02/27/19
  • Complementation analyses of the novel temperature sensitive pheT mutant pheT45 multi copy pheU+ clone in Escherichia coli, Aqua-Terr Golden Jubilee International Conference on Genome Biology and Host Defence: Bacteria to Mammals, 02/27/19
  • The Pertussis Puzzle: Unraveling Resurgence and Vaccine Evolution for a Safer Future, Kalaignar Centenary International Medical Conference on the Future of Medicine, 01/19/24, Chennai

Other notable credits

  • Won Maruthu Pandiar Endowment Scholarship in the year 2008 for having secured the highest mark in the University Examination for the academic year 2007-2008 by Madurai Kamaraj University.
  • President award holder in Bharath Scouts and Guides.
  • Done two years (2007-2008) service to the society under National Service Scheme.
  • Won the ninth National level Youth Parliament Competition held at Madurai Kamaraj University on 26.02.2010.

Projects

1. Title: Unravelling the diversity of hybrid/hetero-pathogenic E. coli strains in community and hospital settings using metagenomic approach

Funding Agency: Christian Medical College, Vellore, India,

Role: Co-investigator 

2. Tilte: Molecular Genetic investigation of Fosfomycin resistance among the clinical isolates of E. coli

 Funding Agency: Christian Medical College, Vellore, India

Role: Co-investigator 

3. Title: Development of rapid molecular diagnostic kit for antimicrobial resistance profiling in health-care-associated bloodstream and urinary tract infections management.

Funding Agency: Indian Council of Medical Research, 

Role: Co-investigator 

4. Title: Exploring the mechanisms of hypermutability and antimicrobial resistance evolution in Pseudomonas aeruginosa can aid in better understanding its implications    for infection management. 

Funding Agency: Indian Council of Medical Research

Role: Co-investigator 

5. Title: A point of care kit for rapid development of serotype-specific Shigella infections (Shigellosis)

Funding Agency: Bill & Melinda Gates Foundation

Role: Co-investigator 

6. Title: To investigate on how antibiotic resistance spreads among different types of Shigella Bacteria

Funding Agency: Medical Research Council (MRC) - UKRI,

Role: Co-investigator 

7. Title: In vitro analysis of the susceptibility of probiotics against oral/|V antimicrobials

Funding Agency: Dr. Reddy's Laboratory, India.

Role: Co-investigator

8. Title: Metagenomic insights into the antibiotic resistome in urban environments

Funding Agency: Christian Medical College, Vellore, India and Vellore Institute of Technology, Vellore, India

Role: Co-investigator

Disclaimer

I do hereby declare that all statements made in the application are true, complete and correct to the best of my knowledge and belief.

Timeline

Ph.D - Molecular Biology

School of Biological Sciences
07.2022 -

M.Sc. - Genomics

Madurai Kamaraj University
01.2011 - undefined

B.Sc. - Biotechnology

Sri Kaliswari College (Madurai Kamaraj University)
01.2009 - undefined

Post-Doctoral Researcher

Department of Clinical Microbiology, Christian Medical College & Hospital
8 2022 - Current
MADHUMATHI IRULAPPANPost-Doctoral Fellow