Sumit Halder
Thane
Summary
An enthusiastic and highly motivated professional having Post Graduated in Bioinformatics and Graduated in Biotechnology with expertise in Biological Data Analysis, Building Bioinformatics Pipelines, and Running end-to-end NGS Pipeline.
Overview
10
10
years of professional experience
Work History
Bioinformatics Engineer
iNDx.Ai
Mumbai
03.2023 - Current
- Validating and Improving In-house NGS Pipeline
- Developing Visualization for NGS Reports
- Performing Data Analysis
- Training Interns and guiding Bioinformatics Analysts.
Bioinformatic Analyst
iNDX.Ai
Mumbai
04.2021 - 03.2023
- Performing required Bioinformatics analysis on clinical data provided by client.
- Developing algorithms and writing R scripts for Data analysis for web-tool.
- QA Testing and Bug reporting.
Bioinformatics Intern
iNDX.Ai
Cupertino
10.2020 - 03.2021
- Analyzing the Cancer Subtypes of Breast, Kidney, and Prostate Cancers
- Exploring and Analyzing the web tools: cBioPortal and LinkedOmics
- Performing Data Preprocessing and Differential Gene Expression analysis on the TCGA Expression data.
Academic Research Editor
Enago, Crimson Interactive Pvt. Ltd.
Goregaon
09.2019 - 11.2019
- Research Article Editing, Formatting, Proofreading, Preparing Cover Letters.
Freelance Researcher
Mr. Lalit Samant
Parel
02.2019 - 06.2019
- The research project was based on Neglected Tropical Diseases (NTD's)
- Responsibilities included: Literature study, finding potential protein targets, study on current drug treatment, finding potential phytochemicals effective against particular NTD's, protein structure modeling, ADMET screening, In-silico docking, and preparing manuscripts for publication.
Freelance Researcher
Mr. Lalit Samant
Parel
07.2018 - 08.2018
- As Research Assistant, responsibilities included: Gathering Target and Ligand information from literature, Protein structure Modelling and gathering active site information, Preparing phytochemicals for In-silico analysis and ADMET screening, Performing Rigid-Flexible Docking, Preparation of Manuscript.
Chief Representative Officer
Epicenter Pvt. Ltd.
Bhayander
04.2014 - 07.2014
- As C.R.E for LG, responsibilities included: Registering complaints from LG product Dealers and their customers on call.
Education
M.Sc. in Bioinformatics -
Patkar Varde College
01.2018
B.Sc. in Biotechnology -
Vartak College
01.2016
H.S.C -
Valia College
01.2013
S.S.C -
St. Xavier’s High School
01.2011
Skills
- NGS Pipeline (from Alignment to Annotation)
- R
- Ubuntu
Recommendation
Haffkine Institute of Research and Testing, Dr. Ashish Asrondkar, Mr. Lalit Samant, 05/17/17, 08/17/17, Protein homology modelling and comparative In-silico docking analysis of Tubulin Beta chain of Wuchereia bancrofti, Brugia malayi, & Brugia timori, causative agents for lymphatic filariasis., https://drive.google.com/open?id=1dc03SoiN0weyhGEltnfcIjVUWgn-ID7I
Bioinformatics Skills
- Developing BI Pipelines and Algorithms
- Oncogenomics Databases and Web tools
- Oncogene Variant Analysis
- Clinical Trial Data Analysis
- Expression Data Analysis
- Predictive and Inferential ML Model building
- Data Pre-processing
- Genomic and Proteomic Databases
- Sequence alignments and analysis
- Basics of Mathematics and Statistical Measures
- Protein Structure Prediction, Modelling, and Validation
- Protein Structure modelling
- ADMET Web Tools
- Drug Designing
- Docking
Coursework
- Machine Learning A-Z: Hands-On Python & R in Data Science by Kirill Eremenko & Hadelin de Ponteves.
- The Data Science Course 2018: Complete Data Science Bootcamp by 365 Careers.
- Fundamentals of Data Visualization in Tableau by 365 Careers.
- R
- Introduction to Python
Academic Research Project
I have had the pleasure of supervising Mr. Sumit Halder for two semesters, beginning in August 2017. He is a brilliant student and understands the subject very well. He has quick learning ability, patience and hardworking skills. He has a very well organized, detail-oriented approach to completing his tasks also has a strong interpersonal and communication skills. I strongly recommend Sumit for future positions in the industry or academic institute.
Personal Information
Date of Birth: 07/15/95
Hobbies and Interests
- Machine Learning & Data Science
- NGS & Biomarker
- Cooking
- Walking
- Health & fitness
- Origami
- Listening Music
- Playing Digital Games
Disclaimer
I do hereby declare that all the information given above is true to the best of my knowledge and belief.
Languages
Marathi
First Language
English
Upper Intermediate (B2)
B2
Bengali
Elementary (A2)
A2
Hindi
Upper Intermediate (B2)
B2
Timeline
Bioinformatics Engineer
iNDx.Ai
03.2023 - Current
Bioinformatic Analyst
iNDX.Ai
04.2021 - 03.2023
Bioinformatics Intern
iNDX.Ai
10.2020 - 03.2021
Academic Research Editor
Enago, Crimson Interactive Pvt. Ltd.
09.2019 - 11.2019
Freelance Researcher
Mr. Lalit Samant
02.2019 - 06.2019
Freelance Researcher
Mr. Lalit Samant
07.2018 - 08.2018
Chief Representative Officer
Epicenter Pvt. Ltd.
04.2014 - 07.2014
M.Sc. in Bioinformatics -
Patkar Varde College
B.Sc. in Biotechnology -
Vartak College
H.S.C -
Valia College
S.S.C -
St. Xavier’s High School
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