Summary
Work History
Education
Skills
Accomplishments
Languages
Affiliations
Timeline
Generic

Bandita Nayak

Ames

Summary

A diligent molecular biologist specializing in biotechnology, cellular and molecular biology with a proven history of yielding results as required. Implementing critical thinking for experimental design and data analysis to generate new insights into the research. Well-versed with standard molecular and cell biology techniques with the ability to perform experiments dexterously, and corroborate advantageously across multi-disciplinary teams.

Work History

Post Doctoral Research Associate

Iowa state University
Ames
05.2024 - Current

Cell Culture:

  • Hands-on experience with HepG2 cell culture (uninfected and parasite-infected cells)
  • Hybridoma cell culture (aseptic techniques, maintenance, subculture, cryopreservation)
  • Drug screening in infected HepG2 cell culture
  • Cell cytotoxicity assay
  • Proficient in maintaining sterile conditions to prevent contamination
  • Experienced in the optimization of culture conditions for cell growth and proliferation
  • Skilled in cryopreserving cells and ensuring long-term viability

Genomics:

  • Expertise in designing CRISPR/Cas9 strategies for gene editing
  • Southern blotting and transcriptomics
  • Primer designing, genomic DNA isolation, and DNA cloning
  • RNA isolation, cDNA synthesis, and quantitative PCR.
  • Proficient in troubleshooting and optimizing PCR conditions
  • Experienced in performing transcriptome analysis to study gene expression patterns

Proteomics:

  • Recombinant protein expression and purification
  • SDS-PAGE and Western blotting
  • Immuno-pulldown assay and antibody generation
  • Skilled in optimizing protein expression conditions for maximum yield
  • Proficient in protein purification techniques, including affinity chromatography
  • Experienced in interpreting Western blot results and troubleshooting issues

Imaging Techniques:

  • Immunofluorescence assay
  • Extensive use of bright field and fluorescence microscopy
  • Familiarity with commonly used fluorophores
  • Skilled in preparing samples for microscopy, including fixation and staining
  • Proficient in using image analysis software to quantify fluorescence intensity
  • Experienced in multi-channel imaging and co-localization studies

Electroporation method for transfection:

  • Transfection in Plasmodium-infected RBCs
  • Parasite cloning to obtain clonal populations by limiting dilution
  • Expertise in electroporation methods
  • Skilled in optimizing transfection efficiency and minimizing cell toxicity
  • Experienced in selecting and expanding successfully transfected cell populations

Assays and Techniques:

  • Proficient in performing cell viability and proliferation assays
  • Experienced in conducting cytotoxicity assays to evaluate drug effects
  • Skilled in setting up and interpreting results from various bioassays

Data Analysis:

  • Experienced in using bioinformatics tools for sequence alignment and analysis
  • Proficient in statistical analysis using GraphPad Prism
  • Skilled in presenting data through clear and concise figures and tables

Additional Skills:

  • Strong background in molecular cloning techniques
  • Proficient in performing immunoprecipitation and co-immunoprecipitation assays
  • Experienced in conducting functional assays to study protein activity

Education

Ph.D. - Molecular Microbiology And Immunology Division

CSIR-Central Drug Research Institute
Lucknow
08-2023

Skills

Cell culture (Hep G2; Hybridoma) maintenance, sub-culture and cryopreservation

Molecular and Cell Biology techniques

Protein expression, purification and polyclonal antibody generation

Immunofluorescence assay, fluorescence microscopy and bright field microscopy

Transfection

Laboratory management and training

Presentation of scientific reports

Organization and time management

Technical troubleshooting

Great at communication and a team player

Writing scientific article

Accomplishments

· EMBL corporate partnership Travel grant to attend BioMalParXIX: Biology and pathology of the malaria parasite 2023, Heidelberg, Germany.

· Senior Research Fellowship awarded by CSIR-UGC (CSIR-SRF), New Delhi, India. August 2019 to August 2022.

· Junior Research Fellowship awarded by CSIR-UGC (CSIR-JRF), New Delhi, India. August 2017 to August 2019.

· Qualified CSIR-UGC National Eligibility Test conducted in December 2016 with All India Rank 71.

Languages

English
First Language

Affiliations

  • Srivastava, P.N., Nayak, B., Dewaker, V., Mishra, S., (2022). C ‑ Mannosyltransferase Is Essential for Malaria Transmission in Plasmodium berghei. (Published in ACS Infectious diseases)
  • https://doi.org/10.1021/acsinfecdis.2c00239
  • Kumar, S., Nayak, B., Mehra, P., Mishra, S., (2022). Protein kinase 9 is not required for completion of the Plasmodium bergheilife cycle. Microbiological Research260, 127051.
  • https://doi.org/10.1016/j.micres.2022.127051
  • Gupta, R., Mishra, A., Hasan, H., Sunil, C., Narwal, K., Nayak, B., Narain, P., Satish, S., (2020). Secreted protein with altered thrombospondin repeat ( SPATR ) is essential for asexual blood stages but not required for hepatocyte invasion by the malaria parasite Plasmodium berghei. Molecular Microbiology 113, 478–491.
  • https://doi.org/10.1111/mmi.14432
  • Kumar, V., Behl, A., Kapoor, P., Nayak, B., Singh, G., Pal, A., Mishra, S., Singh, T., Chandra, P., Hora, R., (2019). International Journal of Biological Macromolecules Inner membrane complex 1l protein of Plasmodium falciparum links membrane lipids with cytoskeletal element ‘ actin ’ and its associated motor ‘ myosin’. International Journal of Biological Macromolecules, 126, 673–684.
  • https://doi.org/10.1016/j.ijbiomac.2018.12.239
  • Nayak, B., Paul, P., Mishra, S., (2023). Neddylation is essential for malaria transmission in Plasmodium berghei. (Under Revision in mBio)
  • Nayak, B., Paul, P., Mishra, S., (2023). Plasmodium berghei E2- conjugating enzyme PbUbc12 is indispensable for transmission of parasite from mammalian host to mosquito vector. (Under communication)

Timeline

Post Doctoral Research Associate

Iowa state University
05.2024 - Current

Ph.D. - Molecular Microbiology And Immunology Division

CSIR-Central Drug Research Institute
Bandita Nayak